.. DO NOT EDIT. .. THIS FILE WAS AUTOMATICALLY GENERATED BY SPHINX-GALLERY. .. TO MAKE CHANGES, EDIT THE SOURCE PYTHON FILE: .. "content/tutorials/03-gravity/plot_1b_gravity_gradiometry.py" .. LINE NUMBERS ARE GIVEN BELOW. .. only:: html .. note:: :class: sphx-glr-download-link-note :ref:`Go to the end ` to download the full example code. .. rst-class:: sphx-glr-example-title .. _sphx_glr_content_tutorials_03-gravity_plot_1b_gravity_gradiometry.py: Forward Simulation of Gradiometry Data on a Tree Mesh ===================================================== Here we use the module *simpeg.potential_fields.gravity* to predict gravity gradiometry data for a synthetic density contrast model. The simulation is carried out on a tree mesh. For this tutorial, we focus on the following: - How to define the survey when we want multiple field components - How to predict gravity gradiometry data for a density contrast model - How to construct tree meshes based on topography and survey geometry - The units of the density contrast model and resulting data .. GENERATED FROM PYTHON SOURCE LINES 18-21 Import Modules -------------- .. GENERATED FROM PYTHON SOURCE LINES 21-35 .. code-block:: Python import numpy as np from scipy.interpolate import LinearNDInterpolator import matplotlib as mpl import matplotlib.pyplot as plt from discretize import TreeMesh from discretize.utils import mkvc, refine_tree_xyz, active_from_xyz from simpeg.utils import plot2Ddata, model_builder from simpeg import maps from simpeg.potential_fields import gravity # sphinx_gallery_thumbnail_number = 2 .. GENERATED FROM PYTHON SOURCE LINES 36-42 Defining Topography ------------------- Surface topography is defined as an (N, 3) numpy array. We create it here but the topography could also be loaded from a file. .. GENERATED FROM PYTHON SOURCE LINES 42-49 .. code-block:: Python [x_topo, y_topo] = np.meshgrid(np.linspace(-200, 200, 41), np.linspace(-200, 200, 41)) z_topo = -15 * np.exp(-(x_topo**2 + y_topo**2) / 80**2) x_topo, y_topo, z_topo = mkvc(x_topo), mkvc(y_topo), mkvc(z_topo) xyz_topo = np.c_[x_topo, y_topo, z_topo] .. GENERATED FROM PYTHON SOURCE LINES 50-58 Defining the Survey ------------------- Here, we define survey that will be used for the forward simulation. Gravity surveys are simple to create. The user only needs an (N, 3) array to define the xyz locations of the observation locations, and a list of field components which are to be measured. .. GENERATED FROM PYTHON SOURCE LINES 58-86 .. code-block:: Python # Define the observation locations as an (N, 3) numpy array or load them x = np.linspace(-80.0, 80.0, 17) y = np.linspace(-80.0, 80.0, 17) x, y = np.meshgrid(x, y) x, y = mkvc(x.T), mkvc(y.T) fun_interp = LinearNDInterpolator(np.c_[x_topo, y_topo], z_topo) z = fun_interp(np.c_[x, y]) + 5 receiver_locations = np.c_[x, y, z] # Define the component(s) of the field we want to simulate as strings within # a list. Here we measure the x, y and z components of the gravity anomaly at # each observation location. components = ["gxz", "gyz", "gzz"] # Use the observation locations and components to define the receivers. To # simulate data, the receivers must be defined as a list. receiver_list = gravity.receivers.Point(receiver_locations, components=components) receiver_list = [receiver_list] # Defining the source field. source_field = gravity.sources.SourceField(receiver_list=receiver_list) # Defining the survey survey = gravity.survey.Survey(source_field) .. GENERATED FROM PYTHON SOURCE LINES 87-92 Defining an OcTree Mesh ----------------------- Here, we create the OcTree mesh that will be used in the forward simulation. .. GENERATED FROM PYTHON SOURCE LINES 92-125 .. code-block:: Python dx = 5 # minimum cell width (base mesh cell width) in x dy = 5 # minimum cell width (base mesh cell width) in y dz = 5 # minimum cell width (base mesh cell width) in z x_length = 240.0 # domain width in x y_length = 240.0 # domain width in y z_length = 120.0 # domain width in z # Compute number of base mesh cells required in x and y nbcx = 2 ** int(np.round(np.log(x_length / dx) / np.log(2.0))) nbcy = 2 ** int(np.round(np.log(y_length / dy) / np.log(2.0))) nbcz = 2 ** int(np.round(np.log(z_length / dz) / np.log(2.0))) # Define the base mesh hx = [(dx, nbcx)] hy = [(dy, nbcy)] hz = [(dz, nbcz)] mesh = TreeMesh([hx, hy, hz], x0="CCN") # Refine based on surface topography mesh = refine_tree_xyz( mesh, xyz_topo, octree_levels=[2, 2], method="surface", finalize=False ) # Refine box based on region of interest xp, yp, zp = np.meshgrid([-100.0, 100.0], [-100.0, 100.0], [-80.0, 0.0]) xyz = np.c_[mkvc(xp), mkvc(yp), mkvc(zp)] mesh = refine_tree_xyz(mesh, xyz, octree_levels=[2, 2], method="box", finalize=False) mesh.finalize() .. rst-class:: sphx-glr-script-out .. code-block:: none /home/vsts/work/1/s/tutorials/03-gravity/plot_1b_gravity_gradiometry.py:113: DeprecationWarning: The surface option is deprecated as of `0.9.0` please update your code to use the `TreeMesh.refine_surface` functionality. It will be removed in a future version of discretize. /home/vsts/work/1/s/tutorials/03-gravity/plot_1b_gravity_gradiometry.py:121: DeprecationWarning: The box option is deprecated as of `0.9.0` please update your code to use the `TreeMesh.refine_bounding_box` functionality. It will be removed in a future version of discretize. .. GENERATED FROM PYTHON SOURCE LINES 126-133 Density Contrast Model and Mapping on OcTree Mesh ------------------------------------------------- Here, we create the density contrast model that will be used to simulate gravity gradiometry data and the mapping from the model to the mesh. The model consists of a less dense block and a more dense sphere. .. GENERATED FROM PYTHON SOURCE LINES 133-196 .. code-block:: Python # Define density contrast values for each unit in g/cc background_density = 0.0 block_density = -0.1 sphere_density = 0.1 # Find the indecies for the active mesh cells (e.g. cells below surface) ind_active = active_from_xyz(mesh, xyz_topo) # Define mapping from model to active cells. The model consists of a value for # each cell below the Earth's surface. nC = int(ind_active.sum()) model_map = maps.IdentityMap(nP=nC) # model will be value of active cells # Define model. Models in SimPEG are vector arrays. model = background_density * np.ones(nC) # You could find the indicies of specific cells within the model and change their # value to add structures. ind_block = ( (mesh.gridCC[ind_active, 0] > -50.0) & (mesh.gridCC[ind_active, 0] < -20.0) & (mesh.gridCC[ind_active, 1] > -15.0) & (mesh.gridCC[ind_active, 1] < 15.0) & (mesh.gridCC[ind_active, 2] > -50.0) & (mesh.gridCC[ind_active, 2] < -30.0) ) model[ind_block] = block_density # You can also use SimPEG utilities to add structures to the model more concisely ind_sphere = model_builder.get_indices_sphere( np.r_[35.0, 0.0, -40.0], 15.0, mesh.gridCC ) ind_sphere = ind_sphere[ind_active] model[ind_sphere] = sphere_density # Plot Density Contrast Model fig = plt.figure(figsize=(9, 4)) plotting_map = maps.InjectActiveCells(mesh, ind_active, np.nan) ax1 = fig.add_axes([0.1, 0.12, 0.73, 0.78]) mesh.plot_slice( plotting_map * model, normal="Y", ax=ax1, ind=int(mesh.h[1].size / 2), grid=True, clim=(np.min(model), np.max(model)), pcolor_opts={"cmap": "viridis"}, ) ax1.set_title("Model slice at y = 0 m") ax1.set_xlabel("x (m)") ax1.set_ylabel("z (m)") ax2 = fig.add_axes([0.85, 0.12, 0.05, 0.78]) norm = mpl.colors.Normalize(vmin=np.min(model), vmax=np.max(model)) cbar = mpl.colorbar.ColorbarBase( ax2, norm=norm, orientation="vertical", cmap=mpl.cm.viridis ) cbar.set_label("$g/cm^3$", rotation=270, labelpad=15, size=12) plt.show() .. image-sg:: /content/tutorials/03-gravity/images/sphx_glr_plot_1b_gravity_gradiometry_001.png :alt: Model slice at y = 0 m :srcset: /content/tutorials/03-gravity/images/sphx_glr_plot_1b_gravity_gradiometry_001.png :class: sphx-glr-single-img .. GENERATED FROM PYTHON SOURCE LINES 197-203 Simulation: Gravity Gradiometry Data on an OcTree Mesh ------------------------------------------------------ Here we demonstrate how to predict gravity anomaly data using the integral formulation. .. GENERATED FROM PYTHON SOURCE LINES 205-209 Define the forward simulation. By setting the ``store_sensitivities`` keyword argument to ``"forward_only"``, we simulate the data without storing the sensitivities .. GENERATED FROM PYTHON SOURCE LINES 209-219 .. code-block:: Python simulation = gravity.simulation.Simulation3DIntegral( survey=survey, mesh=mesh, rhoMap=model_map, active_cells=ind_active, store_sensitivities="forward_only", engine="choclo", ) .. GENERATED FROM PYTHON SOURCE LINES 220-227 .. tip:: Since SimPEG v0.21.0 we can use `Choclo `_ as the engine for running the gravity simulations, which results in faster and more memory efficient runs. Just pass ``engine="choclo"`` when constructing the simulation. .. GENERATED FROM PYTHON SOURCE LINES 229-230 Compute predicted data for some model .. GENERATED FROM PYTHON SOURCE LINES 230-289 .. code-block:: Python dpred = simulation.dpred(model) n_data = len(dpred) # Plot fig = plt.figure(figsize=(10, 3)) n_locations = receiver_locations.shape[0] v_max = np.max(np.abs(dpred)) ax1 = fig.add_axes([0.1, 0.15, 0.25, 0.78]) cplot1 = plot2Ddata( receiver_locations, dpred[0:n_data:3], ax=ax1, ncontour=30, clim=(-v_max, v_max), contourOpts={"cmap": "bwr"}, ) cplot1[0].set_clim((-v_max, v_max)) ax1.set_title(r"$\partial g /\partial x$") ax1.set_xlabel("x (m)") ax1.set_ylabel("y (m)") ax2 = fig.add_axes([0.36, 0.15, 0.25, 0.78]) cplot2 = plot2Ddata( receiver_locations, dpred[1:n_data:3], ax=ax2, ncontour=30, clim=(-v_max, v_max), contourOpts={"cmap": "bwr"}, ) cplot2[0].set_clim((-v_max, v_max)) ax2.set_title(r"$\partial g /\partial y$") ax2.set_xlabel("x (m)") ax2.set_yticks([]) ax3 = fig.add_axes([0.62, 0.15, 0.25, 0.78]) cplot3 = plot2Ddata( receiver_locations, dpred[2:n_data:3], ax=ax3, ncontour=30, clim=(-v_max, v_max), contourOpts={"cmap": "bwr"}, ) cplot3[0].set_clim((-v_max, v_max)) ax3.set_title(r"$\partial g /\partial z$") ax3.set_xlabel("x (m)") ax3.set_yticks([]) ax4 = fig.add_axes([0.89, 0.13, 0.02, 0.79]) norm = mpl.colors.Normalize(vmin=-v_max, vmax=v_max) cbar = mpl.colorbar.ColorbarBase( ax4, norm=norm, orientation="vertical", cmap=mpl.cm.bwr ) cbar.set_label("Eotvos", rotation=270, labelpad=15, size=12) plt.show() .. image-sg:: /content/tutorials/03-gravity/images/sphx_glr_plot_1b_gravity_gradiometry_002.png :alt: $\partial g /\partial x$, $\partial g /\partial y$, $\partial g /\partial z$ :srcset: /content/tutorials/03-gravity/images/sphx_glr_plot_1b_gravity_gradiometry_002.png :class: sphx-glr-single-img .. rst-class:: sphx-glr-timing **Total running time of the script:** (0 minutes 7.292 seconds) **Estimated memory usage:** 288 MB .. _sphx_glr_download_content_tutorials_03-gravity_plot_1b_gravity_gradiometry.py: .. only:: html .. container:: sphx-glr-footer sphx-glr-footer-example .. container:: sphx-glr-download sphx-glr-download-jupyter :download:`Download Jupyter notebook: plot_1b_gravity_gradiometry.ipynb ` .. container:: sphx-glr-download sphx-glr-download-python :download:`Download Python source code: plot_1b_gravity_gradiometry.py ` .. container:: sphx-glr-download sphx-glr-download-zip :download:`Download zipped: plot_1b_gravity_gradiometry.zip ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_